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Deep learning model applied to Real-Time Delineation of Colorectal Polyps
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Abstract
Background: Deep learning models have shown considerable potential to improve diagnostic accuracy across medical fields. Although YOLACT has demonstrated real-time detection and segmentation in non-medical datasets, its application in medical settings remains underexplored. This study evaluated the performance of a YOLACT-derived Real-time Polyp Delineation Model (RTPoDeMo) for real-time use on prospectively recorded colonoscopy videos.
Methods: Twelve combinations of architectures, including Mask-RCNN, YOLACT, and YOLACT++, paired with backbones such as ResNet50, ResNet101, and DarkNet53, were tested on 2,188 colonoscopy images with three image resolution sizes. Dataset preparation involved pre-processing and segmentation annotation, with optimized image augmentation.
Results: RTPoDeMo, using YOLACT-ResNet50, achieved 72.3 mAP and 32.8 FPS for real-time instance segmentation based on COCO annotations. The model performed with a per-image accuracy of 99.59% (95% CI: [99.45% - 99.71%]), sensitivity of 90.63% (95% CI: [78.95% - 93.64%]), specificity of 99.95% (95% CI: [99.93% - 99.97%]) and a F1-score of 0.94 (95% CI: [0.87 – 0.98]). In validation, out of 36 polyps detected by experts, RTPoDeMo missed only one polyp, compared to six missed by senior endoscopists. The model demonstrated good agreement with experts, reflected by a Cohen’s Kappa coefficient of 0.72 (95% CI: [0.54 – 1.00], p <0.0001).
Conclusions: Our model provides new perspectives in the adaptation of YOLACT to the real-time delineation of colorectal polyps. In the future, it could improve the characterization of polyps to be resected during colonoscopy.
Springer Science and Business Media LLC
Title: Deep learning model applied to Real-Time Delineation of Colorectal Polyps
Description:
Abstract
Background: Deep learning models have shown considerable potential to improve diagnostic accuracy across medical fields.
Although YOLACT has demonstrated real-time detection and segmentation in non-medical datasets, its application in medical settings remains underexplored.
This study evaluated the performance of a YOLACT-derived Real-time Polyp Delineation Model (RTPoDeMo) for real-time use on prospectively recorded colonoscopy videos.
Methods: Twelve combinations of architectures, including Mask-RCNN, YOLACT, and YOLACT++, paired with backbones such as ResNet50, ResNet101, and DarkNet53, were tested on 2,188 colonoscopy images with three image resolution sizes.
Dataset preparation involved pre-processing and segmentation annotation, with optimized image augmentation.
Results: RTPoDeMo, using YOLACT-ResNet50, achieved 72.
3 mAP and 32.
8 FPS for real-time instance segmentation based on COCO annotations.
The model performed with a per-image accuracy of 99.
59% (95% CI: [99.
45% - 99.
71%]), sensitivity of 90.
63% (95% CI: [78.
95% - 93.
64%]), specificity of 99.
95% (95% CI: [99.
93% - 99.
97%]) and a F1-score of 0.
94 (95% CI: [0.
87 – 0.
98]).
In validation, out of 36 polyps detected by experts, RTPoDeMo missed only one polyp, compared to six missed by senior endoscopists.
The model demonstrated good agreement with experts, reflected by a Cohen’s Kappa coefficient of 0.
72 (95% CI: [0.
54 – 1.
00], p <0.
0001).
Conclusions: Our model provides new perspectives in the adaptation of YOLACT to the real-time delineation of colorectal polyps.
In the future, it could improve the characterization of polyps to be resected during colonoscopy.
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