Search engine for discovering works of Art, research articles, and books related to Art and Culture
ShareThis
Javascript must be enabled to continue!

What genes are involved in the adaptive intraspecies divergence of aegilops tauschii?

View through CrossRef
The coding sequences of 27,448 genes each of 72 accessions of Aegilops tauschii, representing the entire species range, were obtained using next generation sequencing of transcriptomes from leaf tissue. 9,660 of these genes exhibited high Ka/Ks values exceeding 0.8. 4,336 different GO terms were present in the annotations for this gene set, with 193 of them occurring statistically significantly more often among the genes with high Ka/Ks, indicating variation in what functions and processes were involved in the adaptive intraspecies divergence of A. tauschii. It was shown that A. tauschii genes with high Ka/Ks ratios are primarily those which help plants to adapt to different ecological conditions and respond to changing environments. Those genes whose allelic variation played an essential role in A. tauschii intraspecies divergence included R-Genes (marked with GO terms: GO:0043531, ADP binding, + GO:0051707, response to other organisms, + GO:0006952, defence response); as well as genes involved in photosynthesis, response to light stimulus, the respiratory electron transport chain, transcriptional regulation, microtubule motor activity, and the regulation of the jasmonic acid mediated signalling pathway, etc.
Title: What genes are involved in the adaptive intraspecies divergence of aegilops tauschii?
Description:
The coding sequences of 27,448 genes each of 72 accessions of Aegilops tauschii, representing the entire species range, were obtained using next generation sequencing of transcriptomes from leaf tissue.
9,660 of these genes exhibited high Ka/Ks values exceeding 0.
8.
4,336 different GO terms were present in the annotations for this gene set, with 193 of them occurring statistically significantly more often among the genes with high Ka/Ks, indicating variation in what functions and processes were involved in the adaptive intraspecies divergence of A.
tauschii.
It was shown that A.
tauschii genes with high Ka/Ks ratios are primarily those which help plants to adapt to different ecological conditions and respond to changing environments.
Those genes whose allelic variation played an essential role in A.
tauschii intraspecies divergence included R-Genes (marked with GO terms: GO:0043531, ADP binding, + GO:0051707, response to other organisms, + GO:0006952, defence response); as well as genes involved in photosynthesis, response to light stimulus, the respiratory electron transport chain, transcriptional regulation, microtubule motor activity, and the regulation of the jasmonic acid mediated signalling pathway, etc.

Related Results

Identification and Analysis of RNA Editing Sites in the Chloroplast Transcripts of Aegilops tauschii L.
Identification and Analysis of RNA Editing Sites in the Chloroplast Transcripts of Aegilops tauschii L.
RNA editing is an important way to convert cytidine (C) to uridine (U) at specific sites within RNA molecules at a post-transcriptional level in the chloroplasts of higher plants. ...
Cellular and physiological responses to drought stress in Aegilops tauschii genotypes
Cellular and physiological responses to drought stress in Aegilops tauschii genotypes
Drought stress is one of the most important limiting factors in crop yield through impact on the cellular and physiological functions of the plant. Therefore, the study of physiolo...
A Nutritional Comparison Study of Three Oaks Species Grown in Gara Mountains
A Nutritional Comparison Study of Three Oaks Species Grown in Gara Mountains
The preferred livelihood assets for meat and nutritious milk in thousands villages of Kurdistan rejoin/Iraq are sheep and goats. They generally rely on free roaming in rangeland du...
Sequencing and annotation of the chloroplast genome of Amblyopyrum muticum (Poaceae)
Sequencing and annotation of the chloroplast genome of Amblyopyrum muticum (Poaceae)
The complete chloroplast genomes of two Amblyopyrum muticum (syn. Aegilops mutica) accessions, k-3979 and k-3981, were sequenced, measuring 136911 and 136907 bp, respectively. Alig...
Elements and Evolutionary Determinants of Genomic Divergence Between Paired Primary and Metastatic Tumors
Elements and Evolutionary Determinants of Genomic Divergence Between Paired Primary and Metastatic Tumors
ABSTRACT Can metastatic-primary (M-P) genomic divergence measured from next generation sequencing reveal the natural history of metastatic dissem...
Molecular Analyses of Deletion of the Long Arm of Chromosome 20 in Myelodysplastic Syndromes
Molecular Analyses of Deletion of the Long Arm of Chromosome 20 in Myelodysplastic Syndromes
Abstract Abstract 3834 Del(20q), one of the common chromosome abnormalities in myeloid neoplasms, is observed in 5 to 10% of patients with myelodyspla...

Back to Top