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Optimizing viral genome subsampling by genetic diversity and temporal distribution (TARDiS) for phylogenetics
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Abstract
Summary
TARDiS is a novel phylogenetic tool for optimal genetic subsampling. It optimizes both genetic diversity and temporal distribution through a genetic algorithm.
Availability and implementation
TARDiS, along with example datasets and a user manual, is available at https://github.com/smarini/tardis-phylogenetics
Oxford University Press (OUP)
Title: Optimizing viral genome subsampling by genetic diversity and temporal distribution (TARDiS) for phylogenetics
Description:
Abstract
Summary
TARDiS is a novel phylogenetic tool for optimal genetic subsampling.
It optimizes both genetic diversity and temporal distribution through a genetic algorithm.
Availability and implementation
TARDiS, along with example datasets and a user manual, is available at https://github.
com/smarini/tardis-phylogenetics.
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