Javascript must be enabled to continue!
The Complete Chloroplast Genome of Erythrina variegata L. (Papilionoideae, Fabaceae)
View through CrossRef
ABSTRACTErythrina variegata L. 1754, a thorny deciduous tree of Fabaceae, contains various chemical compounds such as alkaloids, flavonoids, and triterpenoids and exhibits anti‐depressant, anti‐inflammatory, and antidiabetic activities. However, genomic data of E. variegata are limited. In this study, the complete chloroplast genome of E. variegata was sequenced and characterized using Illumina sequencing platform. The chloroplast genome of E. variegata was 152,351 bp in length and consisted of a large single copy (82,907 bp), a small single copy (26,309 bp), and two inverted repeat regions (16,826 bp). There were 79 protein‐coding genes, 30 transfer RNA genes, and four ribosomal RNA genes. Comparative analysis revealed high conservation of chloroplast genomes among Erythrina species regarding genome size, structure, and gene content. The phylogenetic study also indicated a close relationship between E. variagata and E. sanwicensis. This study provides initial plastome data for further genomic studies examining E. variegata and related species in Fabaceae.
Title: The Complete Chloroplast Genome of Erythrina variegata L. (Papilionoideae, Fabaceae)
Description:
ABSTRACTErythrina variegata L.
1754, a thorny deciduous tree of Fabaceae, contains various chemical compounds such as alkaloids, flavonoids, and triterpenoids and exhibits anti‐depressant, anti‐inflammatory, and antidiabetic activities.
However, genomic data of E.
variegata are limited.
In this study, the complete chloroplast genome of E.
variegata was sequenced and characterized using Illumina sequencing platform.
The chloroplast genome of E.
variegata was 152,351 bp in length and consisted of a large single copy (82,907 bp), a small single copy (26,309 bp), and two inverted repeat regions (16,826 bp).
There were 79 protein‐coding genes, 30 transfer RNA genes, and four ribosomal RNA genes.
Comparative analysis revealed high conservation of chloroplast genomes among Erythrina species regarding genome size, structure, and gene content.
The phylogenetic study also indicated a close relationship between E.
variagata and E.
sanwicensis.
This study provides initial plastome data for further genomic studies examining E.
variegata and related species in Fabaceae.
Related Results
Inferring the evolutionary mechanism of the chloroplast genome size by comparing whole-chloroplast genome sequences in seed plants
Inferring the evolutionary mechanism of the chloroplast genome size by comparing whole-chloroplast genome sequences in seed plants
AbstractThe chloroplast genome originated from photosynthetic organisms and has retained the core genes that mainly encode components of photosynthesis. However, the causes of vari...
The accumulation of chloroplast small RNAs in unicellular alga
Chlamydomonas reinhardtii
is affected by nitrogen deprivation
The accumulation of chloroplast small RNAs in unicellular alga
Chlamydomonas reinhardtii
is affected by nitrogen deprivation
ABSTRACT
Small RNAs generated from the chloroplast genome may play a role in gene regulation. Given that chloroplast function is affected by nitr...
Hyperspectral imaging for chloroplast movement detection
Hyperspectral imaging for chloroplast movement detection
SummaryWe employed hyperspectral imaging to detect chloroplast positioning inNicotiana benthamianaandArabidopsis thalianaleaves and assess its influence on commonly used vegetation...
A systematic comparison of eight new plastome sequences from
Ipomoea
L
A systematic comparison of eight new plastome sequences from
Ipomoea
L
Background
Ipomoea
is the largest genus in the family Convolvulaceae. The species in this genus have been widely us...
Chloroplast phylogenomics and the dynamic evolution of Santalum (Santalaceae)
Chloroplast phylogenomics and the dynamic evolution of Santalum (Santalaceae)
Abstract
Background
Santalum (Santalaceae, sandalwood) is a hemiparasitic genus including approximately 15 extant species. It is known for its aromatic heartwood oil, whi...
A Comparative Analysis of the Chloroplast Genomes of Four Polygonum Medicinal Plants
A Comparative Analysis of the Chloroplast Genomes of Four Polygonum Medicinal Plants
Polygonum is a generalized genus of the Polygonaceae family that includes various herbaceous plants. In order to provide aid in understanding the evolutionary and phylogenetic rela...
Next-generation sequencing based Cyperus niveus (Cyperaceae) complete chloroplast genome: A comparative analysis and phylogeny
Next-generation sequencing based Cyperus niveus (Cyperaceae) complete chloroplast genome: A comparative analysis and phylogeny
Cyperus niveus, a perennial herb, holds significant traditional and scientific medicinal value. In this study, the complete chloroplast genome sequence of C. niveus was assembled a...
The chloroplast genome sequence and phylogenetic analysis of Rubia alata Wall and Rubia ovatifolia Z. Ying Zhang.(Rubiaceae)
The chloroplast genome sequence and phylogenetic analysis of Rubia alata Wall and Rubia ovatifolia Z. Ying Zhang.(Rubiaceae)
Abstract
Background Rubiaceae, a genus encompassing approximately 70 species distributed globally, includes Rubia alata Wall and Rubia ovatifolia Z. Ying Zhang, distinctive...

