Javascript must be enabled to continue!
Metagenome-assembled genomes from the temperate forest phyllosphere in eastern Canada
View through CrossRef
The phyllosphere is host to diverse microbial communities surviving in dynamic environmental conditions, and which form important relationships with their hosts. Here, we constructed metagenome-assembled genomes (MAGs) from 25 temperate forest phyllosphere samples collected in Eastern Canada. We found 423 dereplicated MAGs with completeness ≥ 50% and contamination ≤ 10%, using a combination of co-assembly strategies. The MAGs were predominantly classified into the bacterial phyla Pseudomonadota (n=197), Actinomycetota (n=88), and Acidobacteriota (n=50), and included 2 archaeal MAGs in the phylum Thermoproteota. These genomes can help to improve reference database entries of phyllosphere affiliated microbes, increasing our understanding of phyllosphere microbial phylogenomic and community dynamics and the ecological roles of phyllosphere microbiomes.
Title: Metagenome-assembled genomes from the temperate forest phyllosphere in eastern Canada
Description:
The phyllosphere is host to diverse microbial communities surviving in dynamic environmental conditions, and which form important relationships with their hosts.
Here, we constructed metagenome-assembled genomes (MAGs) from 25 temperate forest phyllosphere samples collected in Eastern Canada.
We found 423 dereplicated MAGs with completeness ≥ 50% and contamination ≤ 10%, using a combination of co-assembly strategies.
The MAGs were predominantly classified into the bacterial phyla Pseudomonadota (n=197), Actinomycetota (n=88), and Acidobacteriota (n=50), and included 2 archaeal MAGs in the phylum Thermoproteota.
These genomes can help to improve reference database entries of phyllosphere affiliated microbes, increasing our understanding of phyllosphere microbial phylogenomic and community dynamics and the ecological roles of phyllosphere microbiomes.
Related Results
Drivers of phyllosphere microbial functional diversity in a neotropical forest
Drivers of phyllosphere microbial functional diversity in a neotropical forest
Abstract
Background
The phyllosphere is an important microbial habitat but our understanding of how plant hosts drive the compo...
Divergence and convergence in epiphytic and endophytic phyllosphere bacterial communities of rice landraces
Divergence and convergence in epiphytic and endophytic phyllosphere bacterial communities of rice landraces
ABSTRACT
Phyllosphere-associated microbes can significantly alter host plant fitness, with distin...
Effects of maize variety on the structure of maize phyllosphere fungal communities
Effects of maize variety on the structure of maize phyllosphere fungal communities
Abstract
It is well known that plant genotype can regulate phyllosphere fungi at the species level. However, little is known about how plant varieties shape the fungal comm...
Factors influencing and patterns of forest utilization in communities around the Huay Tak Teak Biosphere Reserve, Lampang Province
Factors influencing and patterns of forest utilization in communities around the Huay Tak Teak Biosphere Reserve, Lampang Province
Background and Objectives: To establish the land regulation, it is necessary to know basic information of the surrounding community’s land use and to be aware of basic forest laws....
Divergence and convergence in epiphytic and endophytic phyllosphere bacterial communities of rice landraces
Divergence and convergence in epiphytic and endophytic phyllosphere bacterial communities of rice landraces
ABSTRACT
Phyllosphere-associated microbes can significantly alter host plant fitness, with distinct functions provided by bacteria inhabiting the...
Secondary Succession in the Lowland Forests of the Marlborough Sounds Maritime Park
Secondary Succession in the Lowland Forests of the Marlborough Sounds Maritime Park
<p>This study documents aspects of the forest recovery process in secondary communities of the Marlborough sounds Maritime park. some 39 types of seral vegetation were recogn...
Characterization of metagenome-assembled genomes of two endo-archaea of Candida tropicalis
Characterization of metagenome-assembled genomes of two endo-archaea of Candida tropicalis
IntroductionHost-microbe interactions are pivotal in host biology, ecology, and evolution. Recent developments in sequencing technologies have provided newer insights into the same...
Investigations of the bacterial sink for plant emissions of chloromethane
Investigations of the bacterial sink for plant emissions of chloromethane
Etude du puits bactérien pour les émissions végétales de chlorométhane
Le chlorométhane est le plus abondant des composés organo-halogénés dans l’atmosphère et il e...

