Javascript must be enabled to continue!
Metagenome-assembled genomes from the temperate forest phyllosphere in eastern Canada
View through CrossRef
The phyllosphere is host to diverse microbial communities surviving in dynamic environmental conditions, and which form important relationships with their hosts. Here, we constructed metagenome-assembled genomes (MAGs) from 25 temperate forest phyllosphere samples collected in Eastern Canada. We found 423 dereplicated MAGs with completeness ≥ 50% and contamination ≤ 10%, using a combination of co-assembly strategies. The MAGs were predominantly classified into the bacterial phyla Pseudomonadota (n=197), Actinomycetota (n=88), and Acidobacteriota (n=50), and included 2 archaeal MAGs in the phylum Thermoproteota. These genomes can help to improve reference database entries of phyllosphere affiliated microbes, increasing our understanding of phyllosphere microbial phylogenomic and community dynamics and the ecological roles of phyllosphere microbiomes.
Title: Metagenome-assembled genomes from the temperate forest phyllosphere in eastern Canada
Description:
The phyllosphere is host to diverse microbial communities surviving in dynamic environmental conditions, and which form important relationships with their hosts.
Here, we constructed metagenome-assembled genomes (MAGs) from 25 temperate forest phyllosphere samples collected in Eastern Canada.
We found 423 dereplicated MAGs with completeness ≥ 50% and contamination ≤ 10%, using a combination of co-assembly strategies.
The MAGs were predominantly classified into the bacterial phyla Pseudomonadota (n=197), Actinomycetota (n=88), and Acidobacteriota (n=50), and included 2 archaeal MAGs in the phylum Thermoproteota.
These genomes can help to improve reference database entries of phyllosphere affiliated microbes, increasing our understanding of phyllosphere microbial phylogenomic and community dynamics and the ecological roles of phyllosphere microbiomes.
Related Results
Drivers of phyllosphere microbial functional diversity in a neotropical forest
Drivers of phyllosphere microbial functional diversity in a neotropical forest
Abstract
Background
The phyllosphere is an important microbial habitat but our understanding of how plant hosts drive the compo...
Divergence and convergence in epiphytic and endophytic phyllosphere bacterial communities of rice landraces
Divergence and convergence in epiphytic and endophytic phyllosphere bacterial communities of rice landraces
ABSTRACT
Phyllosphere-associated microbes can significantly alter host plant fitness, with distin...
Effects of maize variety on the structure of maize phyllosphere fungal communities
Effects of maize variety on the structure of maize phyllosphere fungal communities
Abstract
It is well known that plant genotype can regulate phyllosphere fungi at the species level. However, little is known about how plant varieties shape the fungal comm...
PSV-14 Genome Centric Approaches to Understand Antimicrobial Resistance in the Rumen Microbiome
PSV-14 Genome Centric Approaches to Understand Antimicrobial Resistance in the Rumen Microbiome
Abstract
Global meat and milk demands are projected to increase by 50% by the year 2050, making a highly efficient cattle industry a top priority. Widespread use of ...
7
th
International Symposium on Enabling Technologies for Life Sciences (ETP)
7
th
International Symposium on Enabling Technologies for Life Sciences (ETP)
The seventh in the series of ETP Symposia (see
Rapid Communications in Mass Spectrometry
2012,
26
, ...
Factors influencing and patterns of forest utilization in communities around the Huay Tak Teak Biosphere Reserve, Lampang Province
Factors influencing and patterns of forest utilization in communities around the Huay Tak Teak Biosphere Reserve, Lampang Province
Background and Objectives: To establish the land regulation, it is necessary to know basic information of the surrounding community’s land use and to be aware of basic forest laws....
Improved phyllosphere microbiome composition of tea plant with the application of small peptides in combination with rhamnolipid
Improved phyllosphere microbiome composition of tea plant with the application of small peptides in combination with rhamnolipid
Abstract
Background: Small peptides play a crucial role in plant growth and adaptation to the environment. Exogenous small peptides are often applied together with surfacta...
Microbial community overlap between the phyllosphere and rhizosphere of three plants from Yongxing Island, South China Sea
Microbial community overlap between the phyllosphere and rhizosphere of three plants from Yongxing Island, South China Sea
AbstractPhyllosphere and rhizosphere are unique and wide‐ranging habitats that harbor various microbial communities, which influence plant growth and health, and the productivity o...

