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Machine learning prediction of particle-size distribution from infrared spectra, methodologies and soil features
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Abstract
Accuracy of infrared (IR) models to measure soil particle-size distribution (PSD) depends on soil preparation, methodology (sedimentation, laser), settling times and relevant soil features. Compositional soil data may require log ratio (
ilr
) transformation to avoid numerical biases. Machine learning can relate numerous independent variables that may impact on NIR spectra to assess particle-size distribution. Our objective was to reach high IRS prediction accuracy across a large range of PSD methods and soil properties. A total of 1298 soil samples from eastern Canada were IR-scanned. Spectra were processed by Stochastic Gradient Boosting (SGB) to predict sand, silt, clay and carbon. Slope and intercept of the log-log relationships between settling time and suspension density function (SDF) (R
2
= 0.84-0.92) performed similarly to NIR spectra using either
ilr
-transformed (R
2
= 0.81-0.93) or raw percentages (R
2
= 0.76-0.94). Settling times of 0.67-min and 2-h were the most accurate for NIR predictions (R
2
= 0.49-0.79). The NIR prediction of sand sieving method (R
2
= 0.66) was more accurate than Bouyoucos (R
2
= 0.53). The NIR 2X gain was less accurate (R
2
= 0.69-0.92) than 4X (R
2
= 0.87-0.95). The MIR (R
2
= 0.45-0.80) performed better than NIR (R
2
= 0.40-0.71) spectra. Adding soil carbon, reconstituted bulk density, pH, red-green-blue color, oxalate and Mehlich3 extracts returned R
2
value of 0.86-0.91 for texture prediction. In addition to slope and intercept of the SDF, 4X gain, method and pre-treatment classes, soil carbon and color appeared to be promising features for routine SGB-processed NIR particle-size analysis.
Soil Classification
(
Soil Taxonomy
): Inceptisols, Spodosols
Title: Machine learning prediction of particle-size distribution from infrared spectra, methodologies and soil features
Description:
Abstract
Accuracy of infrared (IR) models to measure soil particle-size distribution (PSD) depends on soil preparation, methodology (sedimentation, laser), settling times and relevant soil features.
Compositional soil data may require log ratio (
ilr
) transformation to avoid numerical biases.
Machine learning can relate numerous independent variables that may impact on NIR spectra to assess particle-size distribution.
Our objective was to reach high IRS prediction accuracy across a large range of PSD methods and soil properties.
A total of 1298 soil samples from eastern Canada were IR-scanned.
Spectra were processed by Stochastic Gradient Boosting (SGB) to predict sand, silt, clay and carbon.
Slope and intercept of the log-log relationships between settling time and suspension density function (SDF) (R
2
= 0.
84-0.
92) performed similarly to NIR spectra using either
ilr
-transformed (R
2
= 0.
81-0.
93) or raw percentages (R
2
= 0.
76-0.
94).
Settling times of 0.
67-min and 2-h were the most accurate for NIR predictions (R
2
= 0.
49-0.
79).
The NIR prediction of sand sieving method (R
2
= 0.
66) was more accurate than Bouyoucos (R
2
= 0.
53).
The NIR 2X gain was less accurate (R
2
= 0.
69-0.
92) than 4X (R
2
= 0.
87-0.
95).
The MIR (R
2
= 0.
45-0.
80) performed better than NIR (R
2
= 0.
40-0.
71) spectra.
Adding soil carbon, reconstituted bulk density, pH, red-green-blue color, oxalate and Mehlich3 extracts returned R
2
value of 0.
86-0.
91 for texture prediction.
In addition to slope and intercept of the SDF, 4X gain, method and pre-treatment classes, soil carbon and color appeared to be promising features for routine SGB-processed NIR particle-size analysis.
Soil Classification
(
Soil Taxonomy
): Inceptisols, Spodosols.
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