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Telomere-to-telomere genome assembly of matsutake (Tricholoma matsutake)
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Abstract
Here, we report the first telomere-to-telomere genome assembly of matsutake (Tricholoma matsutake), which consists of 13 sequences (spanning 161.0 Mb) and a 76 kb circular mitochondrial genome. All the 13 sequences were supported with telomeric repeats at the ends. GC-rich regions are located at the middle of the sequences and are enriched with long interspersed nuclear elements (LINEs). Repetitive sequences including long-terminal repeats (LTRs) and LINEs occupy 71.6% of the genome. A total of 21,887 potential protein-coding genes were predicted. The genomic data reported in this study served not only matsutake gene sequences but also genome structures and intergenic sequences. The information gained would be a great reference for exploring the genetics, genomics, and evolutionary study of matsutake in the future, and ultimately facilitate the conservation of this vulnerable genetic resource.
Oxford University Press (OUP)
Title: Telomere-to-telomere genome assembly of matsutake (Tricholoma matsutake)
Description:
Abstract
Here, we report the first telomere-to-telomere genome assembly of matsutake (Tricholoma matsutake), which consists of 13 sequences (spanning 161.
0 Mb) and a 76 kb circular mitochondrial genome.
All the 13 sequences were supported with telomeric repeats at the ends.
GC-rich regions are located at the middle of the sequences and are enriched with long interspersed nuclear elements (LINEs).
Repetitive sequences including long-terminal repeats (LTRs) and LINEs occupy 71.
6% of the genome.
A total of 21,887 potential protein-coding genes were predicted.
The genomic data reported in this study served not only matsutake gene sequences but also genome structures and intergenic sequences.
The information gained would be a great reference for exploring the genetics, genomics, and evolutionary study of matsutake in the future, and ultimately facilitate the conservation of this vulnerable genetic resource.
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