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A Novel Unorthodox Dimeric Primary Enoyl-CoA Reductase Structure
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ABSTRACT
Enoyl-CoA carboxylases/reductases (ECRs) are enzymes with the fastest carbon dioxide (CO
2
) fixation capabilities, yet the precise mechanisms behind their assembly and catalytic activity are structurally not yet fully understood. Here, we employed cryo X-ray crystallography to reveal the dimeric structural organization of a novel ECR, isolated from mesophilic
Mesorhizobium metallidurans
(
M. metallidurans
). We examined the interactions
in silico
and compared oligomerization of our dimeric ECR from
M. metallidurans
(ECR
Mm_Dim
) with tetrameric ECR from
Burkholderia ambifaria
(ECR
Ba_Tet
)by using size exclusion chromatography in solution. Our
in silico
analysis revealed that specific residues in the
M. metallidurans
ECR that preclude tetramer formation, which could affect the enzyme’s catalytic activity. Additionally, we compared primary ECR sequences and structural variations between
K. setae
and
M. metallidurans
to explore their evolutionary relationships, along with their functional diversity. Our study presents the first example of a dimeric ECR structure which may provide new insights into how dimerization versus tetramerization may have an impact on catalytic function. By detailing how different oligomeric states influence enzyme activity and exploring active site conformational changes, we may offer a further understanding of ECR assembly. This work paves the way for future research into the precise molecular mechanisms that drive ECRs exceptional overall catalytic activity, efficiency and efficacy.
Title: A Novel Unorthodox Dimeric Primary Enoyl-CoA Reductase Structure
Description:
ABSTRACT
Enoyl-CoA carboxylases/reductases (ECRs) are enzymes with the fastest carbon dioxide (CO
2
) fixation capabilities, yet the precise mechanisms behind their assembly and catalytic activity are structurally not yet fully understood.
Here, we employed cryo X-ray crystallography to reveal the dimeric structural organization of a novel ECR, isolated from mesophilic
Mesorhizobium metallidurans
(
M.
metallidurans
).
We examined the interactions
in silico
and compared oligomerization of our dimeric ECR from
M.
metallidurans
(ECR
Mm_Dim
) with tetrameric ECR from
Burkholderia ambifaria
(ECR
Ba_Tet
)by using size exclusion chromatography in solution.
Our
in silico
analysis revealed that specific residues in the
M.
metallidurans
ECR that preclude tetramer formation, which could affect the enzyme’s catalytic activity.
Additionally, we compared primary ECR sequences and structural variations between
K.
setae
and
M.
metallidurans
to explore their evolutionary relationships, along with their functional diversity.
Our study presents the first example of a dimeric ECR structure which may provide new insights into how dimerization versus tetramerization may have an impact on catalytic function.
By detailing how different oligomeric states influence enzyme activity and exploring active site conformational changes, we may offer a further understanding of ECR assembly.
This work paves the way for future research into the precise molecular mechanisms that drive ECRs exceptional overall catalytic activity, efficiency and efficacy.
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