Javascript must be enabled to continue!
Soil-dwelling polychaetes: enigmatic as ever? Some hints on their phylogenetic relationships as suggested by a maximum parsimony analysis of 18S rRNA gene sequences
View through CrossRef
To re-evaluate the various hypotheses on the systematic position of Parergodrilus heideri Reisinger, 1925 and Hrabeiella periglandulata Pizl & Chalupský, 1984, the sole truly terrestrial non-clitellate annelids known to date, their phylogenetic relationships were investigated using a data set of new 18S rDNA sequences of these and other five relevant annelid taxa, including an unknown species of Ctenodrilidae, as well as homologous sequences already available for 18 polychaetes, one aphanoneuran, 11 clitellates, two pogonophorans, one echiuran, one sipunculan, three molluscs and two arthropods. Two different alignments were constructed, according to an algorithmic method (Clustal W) and on the basis of a secondary structure model (DCSE), A maximum parsimony analysis was performed with arthropods as an unambiguous outgroup. With both alignments, the resulting topology confirms the validity of grouping P. heideri and Stygocapitella subterranean Knöllner, 1934 into the family Parergodrilidae. Hrabeiella periglandulata never clusters with them and its position relative to this and other polychaete families is still obscure, but a close relationship with aphanoneurans is suggested by the most parsimonious trees. All these taxa appear to be far from the Clitellata. Most relationships among polychaetes are not supported by significant bootstrap and Bremer values. These polytomies are corroborated by independent evidence and are interpreted as resulting from an ancient emergence and a rapid radiation of Polychaeta.
Title: Soil-dwelling polychaetes: enigmatic as ever? Some hints on their phylogenetic relationships as suggested by a maximum parsimony analysis of 18S rRNA gene sequences
Description:
To re-evaluate the various hypotheses on the systematic position of Parergodrilus heideri Reisinger, 1925 and Hrabeiella periglandulata Pizl & Chalupský, 1984, the sole truly terrestrial non-clitellate annelids known to date, their phylogenetic relationships were investigated using a data set of new 18S rDNA sequences of these and other five relevant annelid taxa, including an unknown species of Ctenodrilidae, as well as homologous sequences already available for 18 polychaetes, one aphanoneuran, 11 clitellates, two pogonophorans, one echiuran, one sipunculan, three molluscs and two arthropods.
Two different alignments were constructed, according to an algorithmic method (Clustal W) and on the basis of a secondary structure model (DCSE), A maximum parsimony analysis was performed with arthropods as an unambiguous outgroup.
With both alignments, the resulting topology confirms the validity of grouping P.
heideri and Stygocapitella subterranean Knöllner, 1934 into the family Parergodrilidae.
Hrabeiella periglandulata never clusters with them and its position relative to this and other polychaete families is still obscure, but a close relationship with aphanoneurans is suggested by the most parsimonious trees.
All these taxa appear to be far from the Clitellata.
Most relationships among polychaetes are not supported by significant bootstrap and Bremer values.
These polytomies are corroborated by independent evidence and are interpreted as resulting from an ancient emergence and a rapid radiation of Polychaeta.
Related Results
Internal transcribed spacers enable species-level Metataxonomic analysis of ciliated protozoa
Internal transcribed spacers enable species-level Metataxonomic analysis of ciliated protozoa
Abstract
Traditional morphology-based ciliate classification is often time-consuming and inaccurate, necessitating molecular approaches. Although 18S rRNA gene seque...
Ecological soil physics as section of ecological soil science
Ecological soil physics as section of ecological soil science
Nowadays, there is a general penetration of ecology in other related sciences. Soil science is not an exception. To the evidence of this, the works of soil scientists may serve, th...
Phylogenetic Classification of Feline Immunodeficiency Virus
Phylogenetic Classification of Feline Immunodeficiency Virus
Background: The feline immunodeficiency virus (FIV) is responsible for a retroviral disease that affects domestic and wild cats worldwide, causing Feline Acquired Immunodeficiency ...
Effect of RNA preservation methods on RNA quantity and quality of field collected avian whole blood
Effect of RNA preservation methods on RNA quantity and quality of field collected avian whole blood
ABSTRACT
A limitation of comparative transcriptomic studies of wild avian populations continues to be sample acquisition and preservation to achi...
Ancestral sequence alignment under optimal conditions
Ancestral sequence alignment under optimal conditions
Abstract
Background
Multiple genome alignment is an important problem in bioinformatics. An important subproblem used by many multiple alignment app...
Phylogenetic analyses of the genus Glaciecola: emended description of the genus Glaciecola, transfer of Glaciecola mesophila, G. agarilytica, G. aquimarina, G. arctica, G. chathamensis, G. polaris and G. psychrophila to the genus Paraglaciecola gen. nov.
Phylogenetic analyses of the genus Glaciecola: emended description of the genus Glaciecola, transfer of Glaciecola mesophila, G. agarilytica, G. aquimarina, G. arctica, G. chathamensis, G. polaris and G. psychrophila to the genus Paraglaciecola gen. nov.
Phylogenetic analyses of the genusGlaciecolawere performed using the sequences of the 16S rRNA gene and the GyrB protein to establish its taxonomic status. The results indicated a ...
Prostor doma u hrvatskim igranim filmovima s temom domovinskog rata
Prostor doma u hrvatskim igranim filmovima s temom domovinskog rata
The dissertation explores the formation of domestic space in contemporary Croatian society through its presentations in the medium of feature films. The cinematic domestic spaces a...
Soil-Available Nutrients Associated with Soil Chemical and Aggregate Properties following Vegetation Restoration in Western Sichuan, China
Soil-Available Nutrients Associated with Soil Chemical and Aggregate Properties following Vegetation Restoration in Western Sichuan, China
The status and drivers of soil-available nutrients in plant-recovered soils are not fully understood, limiting our ability to explore the role of soil-available nutrients in soil g...

