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QSPR Models for Predicting Critical Micelle Concentration of Gemini Cationic Surfactants Combining Machine-Learning Methods and Molecular Descriptors
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A
data set of 231 diverse gemini cationic surfactants has been
developed to correlate the logarithm of critical micelle
concentration (cmc) with the molecular structure using a quantitative
structure-property relationship (QSPR) methods. The QSPR models were
developed using the Online CHEmical Modeling environment (OCHEM). It
provides several machine learning methods and molecular descriptors
sets as a tool to build QSPR models. Molecular descriptors were
calculated by eight different software packages including Dragon v6,
OEstate and ALogPS, CDK, ISIDA Fragment, Chemaxon, Inductive
Descriptor, SIRMS, and PyDescriptor. A total of 64 QSPR models were
generated, and one consensus model developed by using a simple
average of 13 top-ranked individual models. Based on the statistical
coefficient of QSPR models, a consensus model was the best QSPR
models. The model provided the highest R
2
= 0.95, q
2
=
0.95, RMSE = 0.16 and MAE = 0.11 for training set, and R
2
= 0.87, q
2
= 0.87, RMSE = 0.35 and MAE = 0.21 for test set. The model was freely
available at https://ochem.eu/model/8425670 and can be used for
estimation of cmc of new gemini cationic surfactants compound at the
early steps of gemini cationic surfactants development.
Title: QSPR Models for Predicting Critical Micelle Concentration of Gemini Cationic Surfactants Combining Machine-Learning Methods and Molecular Descriptors
Description:
A
data set of 231 diverse gemini cationic surfactants has been
developed to correlate the logarithm of critical micelle
concentration (cmc) with the molecular structure using a quantitative
structure-property relationship (QSPR) methods.
The QSPR models were
developed using the Online CHEmical Modeling environment (OCHEM).
It
provides several machine learning methods and molecular descriptors
sets as a tool to build QSPR models.
Molecular descriptors were
calculated by eight different software packages including Dragon v6,
OEstate and ALogPS, CDK, ISIDA Fragment, Chemaxon, Inductive
Descriptor, SIRMS, and PyDescriptor.
A total of 64 QSPR models were
generated, and one consensus model developed by using a simple
average of 13 top-ranked individual models.
Based on the statistical
coefficient of QSPR models, a consensus model was the best QSPR
models.
The model provided the highest R
2
= 0.
95, q
2
=
0.
95, RMSE = 0.
16 and MAE = 0.
11 for training set, and R
2
= 0.
87, q
2
= 0.
87, RMSE = 0.
35 and MAE = 0.
21 for test set.
The model was freely
available at https://ochem.
eu/model/8425670 and can be used for
estimation of cmc of new gemini cationic surfactants compound at the
early steps of gemini cationic surfactants development.
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